Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOM77146.1 | carA | CLPUN_24610 | CLPUN_37480 | D-hydantoinase. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.908 |
OOM77146.1 | carB_1 | CLPUN_24610 | CLPUN_21040 | D-hydantoinase. | Carbamoyl-phosphate synthase large chain. | 0.764 |
OOM77146.1 | carB_2 | CLPUN_24610 | CLPUN_37470 | D-hydantoinase. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.872 |
OOM77146.1 | pyrB | CLPUN_24610 | CLPUN_40270 | D-hydantoinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.994 |
OOM77146.1 | pyrC | CLPUN_24610 | CLPUN_40250 | D-hydantoinase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.701 |
OOM77146.1 | pyrD | CLPUN_24610 | CLPUN_40220 | D-hydantoinase. | Dihydroorotate dehydrogenase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.927 |
OOM77146.1 | pyrE | CLPUN_24610 | CLPUN_40210 | D-hydantoinase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.903 |
OOM77146.1 | pyrF | CLPUN_24610 | CLPUN_40240 | D-hydantoinase. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.844 |
OOM77146.1 | pyrI | CLPUN_24610 | CLPUN_40260 | D-hydantoinase. | Aspartate carbamoyltransferase regulatory chain. | 0.525 |
OOM77146.1 | pyrR | CLPUN_24610 | CLPUN_11830 | D-hydantoinase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.954 |
carA | OOM77146.1 | CLPUN_37480 | CLPUN_24610 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | D-hydantoinase. | 0.908 |
carA | carB_1 | CLPUN_37480 | CLPUN_21040 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Carbamoyl-phosphate synthase large chain. | 0.994 |
carA | carB_2 | CLPUN_37480 | CLPUN_37470 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.999 |
carA | pyrB | CLPUN_37480 | CLPUN_40270 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carA | pyrC | CLPUN_37480 | CLPUN_40250 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.995 |
carA | pyrD | CLPUN_37480 | CLPUN_40220 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Dihydroorotate dehydrogenase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.939 |
carA | pyrE | CLPUN_37480 | CLPUN_40210 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.917 |
carA | pyrF | CLPUN_37480 | CLPUN_40240 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.934 |
carA | pyrI | CLPUN_37480 | CLPUN_40260 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Aspartate carbamoyltransferase regulatory chain. | 0.973 |
carA | pyrR | CLPUN_37480 | CLPUN_11830 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.869 |
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