Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mngBMannosylglycerate hydrolase. (890 aa)    
Predicted Functional Partners:
manP_1
PTS system mannose-specific EIIBCA component.
 
  
 0.688
nanK_2
N-acetylmannosamine kinase.
  
  
 0.667
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.638
apeA
Putative M18 family aminopeptidase 1.
   
 
 0.619
cmk_1
Cytidylate kinase.
  
    0.619
apeB
Putative M18 family aminopeptidase 2.
   
 
 0.619
clpC
Negative regulator of genetic competence ClpC/MecB; Belongs to the ClpA/ClpB family.
   
  
 0.612
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
   
  
 0.612
clpA
ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family.
   
  
 0.612
licR_3
Putative licABCH operon regulator.
 
     0.610
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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