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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM74212.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
ycjS_1
Putative oxidoreductase YcjS.
     0.956
ycjS_2
Putative oxidoreductase YcjS.
     0.917
OOM74085.1
Hypothetical protein.
 
 
 0.865
OOM74206.1
Hypothetical protein.
  
  
  0.854
OOM74086.1
Xylose isomerase-like TIM barrel.
 
 
 0.852
OOM74088.1
Xylose isomerase-like TIM barrel.
 
 
 0.836
iolW
Scyllo-inositol 2-dehydrogenase.
  
  
  0.833
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.795
afr_2
1,5-anhydro-D-fructose reductase.
  
  
  0.750
OOM74209.1
Xylose isomerase-like TIM barrel.
 
 
 0.720
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.