Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM74215.1DSBA-like thioredoxin domain protein. (302 aa)    
Predicted Functional Partners:
OOM75028.1
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
 
   0.641
spxA
Regulatory protein Spx; Belongs to the ArsC family.
    
 
 0.635
mgsR
Regulatory protein MgsR; Belongs to the ArsC family.
    
 
 0.635
OOM75751.1
NADPH-dependent FMN reductase.
  
    0.611
mhqR_5
HTH-type transcriptional regulator MhqR.
 
     0.586
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.570
trxB_1
Thioredoxin reductase.
  
  
 0.548
trxB_2
Thioredoxin reductase.
  
  
 0.437
trxB_5
Thioredoxin reductase.
  
  
 0.437
OOM74702.1
Hypothetical protein.
  
    0.415
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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