Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OOM74077.1Major facilitator superfamily protein. (380 aa)    
Predicted Functional Partners:
fprA2
Flavo-diiron protein FprA2.
  
 
 0.759
nasF
uroporphyrinogen-III C-methyltransferase.
  
  
 0.709
OOM74078.1
Hypothetical protein.
       0.641
sir
Sulfite reductase.
    
 0.613
fldZ_3
2-enoate reductase FldZ.
 
   
 0.602
nasD
Nitrite reductase.
  
 
 0.595
OOM74713.1
BFD-like [2Fe-2S] binding domain protein.
  
 
 0.595
OOM76831.1
Extracellular exo-alpha-(1->5)-L-arabinofuranosidase precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.591
mmgC
acyl-CoA dehydrogenase.
    
 0.582
OOM80230.1
Ferredoxin.
  
 
 0.570
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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