Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdtB_1dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)    
Predicted Functional Partners:
fdtA
TDP-4-oxo-6-deoxy-alpha-D-glucose-3, 4-oxoisomerase.
 
 
 0.990
fdtC
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase.
 
  0.970
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.932
wbpD
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase.
 
 0.855
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
 
 0.813
pseB
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.796
OOM74046.1
Hypothetical protein.
       0.705
rfbG
CDP-glucose 4,6-dehydratase.
  
 
 0.672
wecA_1
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
  
 
 0.665
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.665
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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