STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOM73573.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
OOM73572.1
Hypothetical protein.
       0.681
OOM73574.1
Hypothetical protein.
     
 0.650
OOM73575.1
Hypothetical protein.
       0.628
OOM73576.1
Hypothetical protein.
       0.628
OOM73577.1
Hypothetical protein.
       0.628
OOM73571.1
Hypothetical protein.
       0.587
OOM73570.1
Hypothetical protein.
       0.534
OOM73578.1
Hypothetical protein.
       0.488
OOM73569.1
Hypothetical protein.
       0.401
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.