Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM73528.1Beta-galactosidase BoGH2A precursor; Belongs to the glycosyl hydrolase 2 family. (802 aa)    
Predicted Functional Partners:
OOM78789.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43A precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.816
agaA
Alpha-galactosidase A precursor.
 
  
  0.814
tabA
Toxin-antitoxin biofilm protein TabA.
 
 
 0.813
OOM82462.1
Hypothetical protein.
  
  
 0.787
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
 
 0.754
OOM78780.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.742
OOM75614.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.735
OOM76696.1
Bacterial alpha-L-rhamnosidase.
 
 
 0.729
cbgA
Beta-galactosidase.
  
  
 
0.723
OOM70183.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.723
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.