Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM73532.1Glycosyl hydrolases family 43. (767 aa)    
Predicted Functional Partners:
OOM73530.1
Hypothetical protein.
 
 
 0.895
OOM73531.1
Hypothetical protein.
 
 
 0.820
OOM82462.1
Hypothetical protein.
  
  
 0.792
OOM82269.1
Hypothetical protein.
 
   
 0.720
celS
Cellulose 1,4-beta-cellobiosidase (reducing end) CelS precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.708
hypBA1_1
Non-reducing end beta-L-arabinofuranosidase.
 
   
 0.705
xynY
Endo-1,4-beta-xylanase Y precursor.
 
  
 0.696
xynC_1
Endo-1,4-beta-xylanase C precursor.
 
  
 0.676
OOM73528.1
Beta-galactosidase BoGH2A precursor; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.671
pemA_2
Pectinesterase A precursor.
 
   
 0.664
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.