Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOM73466.1NADH oxidase. (670 aa)    
Predicted Functional Partners:
mmgC
acyl-CoA dehydrogenase.
  
 0.976
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
 
0.949
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.946
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.946
trxB_1
Thioredoxin reductase.
  
 0.924
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 0.921
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 0.910
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 0.899
acrA_1
acryloyl-CoA reductase electron transfer subunit beta.
  
 0.888
acrA_2
acryloyl-CoA reductase electron transfer subunit beta.
  
 0.888
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.