Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOM73384.1Carboxymuconolactone decarboxylase family protein. (111 aa)    
Predicted Functional Partners:
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.823
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.823
OOM80610.1
Hypothetical protein.
  
     0.774
OOM76664.1
Carboxymuconolactone decarboxylase family protein.
  
  
 
0.642
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.586
OOM76663.1
Cupin domain protein.
 
  
 0.567
bioH
Pimeloyl-[acyl-carrier protein] methyl ester esterase.
 
  
 0.506
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.469
aldA
Putative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
  
 
 0.463
adhR_2
HTH-type transcriptional regulator AdhR.
 
     0.451
Your Current Organism:
Clostridium puniceum
NCBI taxonomy Id: 29367
Other names: ATCC 43978, C. puniceum, DSM 2619, ICMP 12529, NCIB 11596, NCIB:11596, NCIMB 11596, strain BL 70/20
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