Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amyE | bglF_1 | CLPUN_14010 | CLPUN_04040 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_2 | CLPUN_14010 | CLPUN_05750 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_3 | CLPUN_14010 | CLPUN_26390 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_4 | CLPUN_14010 | CLPUN_26400 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_5 | CLPUN_14010 | CLPUN_28010 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_6 | CLPUN_14010 | CLPUN_29310 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | bglF_7 | CLPUN_14010 | CLPUN_29670 | Alpha-amylase precursor. | PTS system beta-glucoside-specific EIIBCA component. | 0.845 |
amyE | glgB | CLPUN_14010 | CLPUN_02260 | Alpha-amylase precursor. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.910 |
amyE | malS | CLPUN_14010 | CLPUN_52170 | Alpha-amylase precursor. | Alpha-amylase precursor. | 0.937 |
amyE | pulA | CLPUN_14010 | CLPUN_45640 | Alpha-amylase precursor. | Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.954 |
bglF_1 | amyE | CLPUN_04040 | CLPUN_14010 | PTS system beta-glucoside-specific EIIBCA component. | Alpha-amylase precursor. | 0.845 |
bglF_1 | bglF_2 | CLPUN_04040 | CLPUN_05750 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.992 |
bglF_1 | bglF_3 | CLPUN_04040 | CLPUN_26390 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.992 |
bglF_1 | bglF_4 | CLPUN_04040 | CLPUN_26400 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.991 |
bglF_1 | bglF_5 | CLPUN_04040 | CLPUN_28010 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.992 |
bglF_1 | bglF_6 | CLPUN_04040 | CLPUN_29310 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.991 |
bglF_1 | bglF_7 | CLPUN_04040 | CLPUN_29670 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.991 |
bglF_1 | malS | CLPUN_04040 | CLPUN_52170 | PTS system beta-glucoside-specific EIIBCA component. | Alpha-amylase precursor. | 0.845 |
bglF_2 | amyE | CLPUN_05750 | CLPUN_14010 | PTS system beta-glucoside-specific EIIBCA component. | Alpha-amylase precursor. | 0.845 |
bglF_2 | bglF_1 | CLPUN_05750 | CLPUN_04040 | PTS system beta-glucoside-specific EIIBCA component. | PTS system beta-glucoside-specific EIIBCA component. | 0.992 |
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