STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hclUnannotated protein. (530 aa)    
Predicted Functional Partners:
citZ
Unannotated protein; Belongs to the citrate synthase family.
  
 0.911
CD158_00290
Unannotated protein.
  
 
 0.862
paaJ
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.844
thlA
Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.844
aldA
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
   
  0.815
CD158_01440
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
   
  0.815
ackA
Unannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
 
 0.801
leuA
Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.800
pta
Unannotated protein.
   
 
 0.788
sucC
Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
 
 0.786
Your Current Organism:
Staphylococcus auricularis
NCBI taxonomy Id: 29379
Other names: ATCC 33753, CCUG 15601, CCUG 36974, CIP 103587, DSM 20609, NCTC 12101, NRRL B-14762, S. auricularis, strain WK 811M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.