STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bltDUnannotated protein. (286 aa)    
Predicted Functional Partners:
CD158_05060
Unannotated protein.
  
     0.696
CD158_03670
Unannotated protein.
  
     0.689
CD158_01145
Unannotated protein.
    
  0.685
CD158_00290
Unannotated protein.
    
  0.670
rpoE
Unannotated protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
 
     0.600
setA
Unannotated protein.
  
     0.580
mreD
Unannotated protein.
  
     0.573
CD158_03835
Unannotated protein.
  
     0.533
femA_2
Unannotated protein.
  
     0.531
femA_1
Unannotated protein.
  
     0.514
Your Current Organism:
Staphylococcus auricularis
NCBI taxonomy Id: 29379
Other names: ATCC 33753, CCUG 15601, CCUG 36974, CIP 103587, DSM 20609, NCTC 12101, NRRL B-14762, S. auricularis, strain WK 811M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.