STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppB_2Unannotated protein. (308 aa)    
Predicted Functional Partners:
oppC_2
Unannotated protein.
 
 0.996
oppF_2
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.991
oppD
Unannotated protein; Belongs to the ABC transporter superfamily.
 0.987
oppC_1
Unannotated protein.
 
 0.983
GCA_001500315_00959
Unannotated protein.
 
 
 0.980
oppF_1
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.968
oppA_1
Unannotated protein.
 
 
 0.955
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.781
CD158_06830
Unannotated protein.
       0.538
ykoD_1
Unannotated protein.
  
 
 0.469
Your Current Organism:
Staphylococcus auricularis
NCBI taxonomy Id: 29379
Other names: ATCC 33753, CCUG 15601, CCUG 36974, CIP 103587, DSM 20609, NCTC 12101, NRRL B-14762, S. auricularis, strain WK 811M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.