Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BU607_07380 | CD158_01960 | GCA_001500315_01509 | GCA_001500315_01510 | Unannotated protein. | Unannotated protein. | 0.860 |
BU607_07380 | CD158_01965 | GCA_001500315_01509 | GCA_001500315_01511 | Unannotated protein. | Unannotated protein. | 0.858 |
BU607_07380 | CD158_01970 | GCA_001500315_01509 | GCA_001500315_01512 | Unannotated protein. | Unannotated protein. | 0.821 |
BU607_07380 | aroA | GCA_001500315_01509 | GCA_001500315_01508 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.882 |
BU607_07380 | aroB | GCA_001500315_01509 | GCA_001500315_01507 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.879 |
BU607_07380 | aroC | GCA_001500315_01509 | GCA_001500315_01506 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.876 |
CD158_01145 | aroA | GCA_001500315_01918 | GCA_001500315_01508 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.996 |
CD158_01145 | aroB | GCA_001500315_01918 | GCA_001500315_01507 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.996 |
CD158_01145 | aroC | GCA_001500315_01918 | GCA_001500315_01506 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.999 |
CD158_01145 | aroE | GCA_001500315_01918 | GCA_001500315_02045 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.947 |
CD158_01145 | aroK | GCA_001500315_01918 | GCA_001500315_02102 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.980 |
CD158_01145 | cmk | GCA_001500315_01918 | GCA_001500315_01489 | Unannotated protein. | Unannotated protein. | 0.552 |
CD158_01960 | BU607_07380 | GCA_001500315_01510 | GCA_001500315_01509 | Unannotated protein. | Unannotated protein. | 0.860 |
CD158_01960 | CD158_01965 | GCA_001500315_01510 | GCA_001500315_01511 | Unannotated protein. | Unannotated protein. | 0.882 |
CD158_01960 | CD158_01970 | GCA_001500315_01510 | GCA_001500315_01512 | Unannotated protein. | Unannotated protein. | 0.857 |
CD158_01960 | aroA | GCA_001500315_01510 | GCA_001500315_01508 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.858 |
CD158_01960 | aroB | GCA_001500315_01510 | GCA_001500315_01507 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.855 |
CD158_01960 | aroC | GCA_001500315_01510 | GCA_001500315_01506 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.833 |
CD158_01965 | BU607_07380 | GCA_001500315_01511 | GCA_001500315_01509 | Unannotated protein. | Unannotated protein. | 0.858 |
CD158_01965 | CD158_01960 | GCA_001500315_01511 | GCA_001500315_01510 | Unannotated protein. | Unannotated protein. | 0.882 |
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