STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0511Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. (713 aa)    
Predicted Functional Partners:
Amet_4517
Superoxide dismutase, copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 
 0.959
katG1
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.945
katG2
Catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.945
Amet_0445
PFAM: FAD linked oxidase domain protein; KEGG: afu:AF0394 D-lactate dehydrogenase, cytochrome-type (dld).
  
 0.924
Amet_0821
PFAM: FAD linked oxidase domain protein; KEGG: cac:CAC2542 FAD/FMN-containing dehydrogenase.
  
 0.924
Amet_3747
PFAM: FAD linked oxidase domain protein; KEGG: tte:TTE0224 FAD/FMN-containing dehydrogenases.
  
 0.924
Amet_1461
KEGG: swo:Swol_2182 alkyl hydroperoxide reductase.
  
 
 0.904
Amet_1462
KEGG: swo:Swol_2181 peroxiredoxin-like protein.
  
 
 0.904
Amet_4328
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sth:STH926 2-cys peroxiredoxin.
  
 
 0.904
Amet_4615
Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.904
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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