STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0682PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain. (159 aa)    
Predicted Functional Partners:
Amet_0681
PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb20130 putative dehydrogenase protein.
 
 0.998
Amet_0683
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: nca:Noca_4271 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
 0.996
Amet_4571
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: chy:CHY_0690 carbon monoxide dehydrogenase, medium subunit.
 
 0.995
Amet_3344
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bha:BH1977 hypothetical protein.
 
 0.989
Amet_4568
PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mta:Moth_1225 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
 0.989
Amet_4569
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mta:Moth_1226 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead.
 
 0.989
Amet_0607
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dps:DP3066 similar to 4-Hydroxybenzoyl-CoA reductase (HcrA).
 
 0.987
Amet_0472
PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dps:DP3066 similar to 4-Hydroxybenzoyl-CoA reductase (HcrA).
 
 0.986
Amet_4564
PFAM: protein of unknown function DUF182; KEGG: aba:Acid345_2647 protein of unknown function DUF182.
 
  
 0.824
Amet_4565
KEGG: gme:Gmet_2140 conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis.
 
  
 0.764
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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