STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0699PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: sfu:Sfum_4079 aldehyde ferredoxin oxidoreductase. (563 aa)    
Predicted Functional Partners:
Amet_3157
PFAM: Aldehyde ferredoxin oxidoreductase-like; KEGG: mac:MA2962 aldehyde ferredoxin oxidoreductase.
  
  
 
0.929
Amet_4643
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: chy:CHY_0789 aldehyde ferredoxin oxidoreductase, tungsten-containing.
  
  
 
0.923
Amet_0678
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; MOFRL domain protein; KEGG: tma:TM1585 glycerate kinase, putative.
     
  0.900
Amet_3168
Molybdenum cofactor synthesis domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.815
Amet_1022
KEGG: mes:Meso_2435 extracellular solute-binding protein, family 1.
 
   
 0.794
Amet_0698
PFAM: amino acid permease-associated region; KEGG: csa:Csal_1907 amino acid permease-associated region.
       0.773
Amet_3158
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mma:MM3327 ferredoxin.
 
 
 0.760
Amet_1023
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: swo:Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein.
 
   
 0.738
Amet_4642
PFAM: thiamineS protein; KEGG: chy:CHY_0791 molybdopterin converting factor, subunit 1.
 
   
 0.720
Amet_3765
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1825 iron-sulfur cluster-binding protein CooF.
   
 
 0.616
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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