STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0767Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (410 aa)    
Predicted Functional Partners:
Amet_4703
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: afu:AF0635 immunogenic protein.
 
    0.685
Amet_0764
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: cno:NT01CX_1206 oxidoreductase, FAD-binding.
  
    0.607
Amet_0765
PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cno:NT01CX_1205 electron transfer flavoprotein beta-subunit.
       0.603
Amet_0766
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, alpha subunit.
       0.603
Amet_3721
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: efa:EF0645 exfoliative toxin A, putative.
  
    0.588
Amet_3313
PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ctc:CTC02311 transport protein (putative Na+/H+ antiporter, similar to hisidine permease).
  
     0.524
Amet_0768
KEGG: cth:Cthe_2523 hypothetical protein.
       0.435
Amet_0763
PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2608 trancriptional regulator of AraC family.
       0.412
Amet_3397
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: cac:CAC1673 large subunit of NADH-dependent glutamate synthase.
      
 0.402
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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