STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0789KEGG: tte:TTE0519 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Amet_3701
KEGG: tte:TTE0517 hypothetical protein.
 
     0.740
Amet_4754
KEGG: tte:TTE2685 hypothetical protein.
  
     0.718
Amet_4755
KEGG: sep:SE0020 hypothetical protein.
  
     0.698
Amet_4314
PFAM: transport-associated protein; KEGG: chy:CHY_0056 putative osmotically inducible protein.
  
     0.548
Amet_2712
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.531
Amet_0139
KEGG: ctc:CTC00249 hypothetical protein.
  
     0.528
secA1
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
       0.527
Amet_4775
KEGG: tte:TTE0043 hypothetical protein.
  
     0.518
Amet_4782
KEGG: cth:Cthe_2712 hypothetical protein.
  
     0.507
Amet_0193
O-antigen polymerase; PFAM: TPR repeat-containing protein; O-antigen polymerase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tte:TTE0644 TPR-repeat-containing proteins.
  
     0.506
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.