STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_1160TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0470 phosphonate transport system permease protein. (280 aa)    
Predicted Functional Partners:
phnC-2
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.988
Amet_1161
TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0470 phosphonate transport system permease protein.
 
  
 
0.982
Amet_0515
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: fnu:FN1135 phosphonates-binding protein.
 
 
 0.962
Amet_1328
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: maq:Maqu_3992 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
 
 0.961
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.960
Amet_1164
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonate transport system substrate-binding protein.
 
 0.960
phnC-3
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.960
Amet_1154
PFAM: phosphonate metabolism; KEGG: oih:OB0970 phosphonate metabolism protein.
 
  
 0.570
Amet_1155
PFAM: phosphonate metabolism PhnJ; KEGG: oih:OB0971 phosphonate metabolism protein.
 
  
 0.539
Amet_1153
KEGG: oih:OB0969 phosphonate metabolism protein.
 
  
 0.522
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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