STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_1358TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase. (1434 aa)    
Predicted Functional Partners:
Amet_1127
TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mhu:Mhun_1325 CoA enzyme activase.
 
   
0.725
Amet_1170
KEGG: cth:Cthe_0353 hypothetical protein.
 
   
 0.622
Amet_3211
PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: mta:Moth_1446 2-hydroxyglutaryl-CoA dehydratase, D-component.
  
 
 0.618
Amet_4068
TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein, mobile region; Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: tte:TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.537
Amet_3212
PFAM: GerA spore germination protein; KEGG: bld:BLi02663 hypothetical protein.
 
     0.477
Amet_3191
Response regulator receiver protein; KEGG: cno:NT01CX_1567 probable enzyme with TIM-barrel fold.
 
     0.462
Amet_1169
KEGG: cth:Cthe_0352 hypothetical protein.
 
   
0.446
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.440
Amet_2219
TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: tte:TTE1319 spore formation protein spoVAC.
  
    0.424
Amet_4225
TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: btl:BALH_4637 stage V sporulation protein AC.
  
    0.424
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.