STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_1471PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22). (517 aa)    
Predicted Functional Partners:
Amet_1472
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.941
Amet_1473
Hypothetical protein.
       0.773
Amet_1045
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_1766
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_2113
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_2845
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_3560
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_3854
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_3971
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Amet_4080
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein.
    0.749
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.