STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_2033KEGG: cth:Cthe_1015 hypothetical protein. (139 aa)    
Predicted Functional Partners:
Amet_2034
KEGG: sfu:Sfum_0850 hypothetical protein.
 
     0.926
Amet_2032
KEGG: hso:HS_1256 periplasmic zinc transporter/adhesin B precursor.
       0.767
Amet_2021
KEGG: gme:Gmet_1161 hypothetical protein.
  
     0.587
Amet_2025
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; KEGG: det:DET0701 corrinoid/iron-sulfur protein, small subunit.
 
     0.554
Amet_2028
TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; KEGG: chy:CHY_1222 acetyl-CoA decarbonylase/synthase complex subunit beta.
 
     0.523
Amet_2026
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; Fe-S cluster domain protein; KEGG: sfu:Sfum_2564 CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
     0.522
Amet_2461
PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0152 aldo/keto reductase.
  
     0.511
Amet_2012
PFAM: Fe-S cluster domain protein; KEGG: mta:Moth_2213 putative Fe-S cluster.
 
     0.488
Amet_1839
PFAM: Fe-S cluster domain protein; KEGG: mta:Moth_2213 putative Fe-S cluster.
 
     0.485
Amet_4062
PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1118 oxidoreductase, aldo/keto reductase family.
  
     0.477
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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