STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_2038TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: dsy:DSY3541 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Amet_2039
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4092 hypothetical protein.
    0.995
Amet_2037
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mba:Mbar_A1343 dipeptide ABC transporter, permease protein.
  
 0.990
Amet_1135
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0988 oligopeptide ABC transporter ATP-binding protein.
  
0.935
Amet_2036
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mma:MM0004 dipeptide ABC transporter, permease protein.
 
  
 0.917
Amet_2907
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease protein dppC.
  
 0.905
Amet_2035
PFAM: extracellular solute-binding protein, family 5; KEGG: cya:CYA_0149 peptide/opine/nickel ABC transporter (PepT) family, substrate-binding protein.
 
    0.894
Amet_2913
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpr:CPR_2256 oligopeptide ABC transporter, permease component.
  
 0.894
Amet_1156
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0972 phosphonate ABC transporter ATP-binding protein.
 
     
0.882
Amet_2063
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB3067 oligopeptide ABC transporter permease.
  
 0.879
Amet_0932
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     
0.850
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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