STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_2165PFAM: proteinase inhibitor I4, serpin; KEGG: cth:Cthe_1270 proteinase inhibitor I4, serpin. (408 aa)    
Predicted Functional Partners:
Amet_3938
KEGG: mxa:MXAN_1647 hypothetical protein.
  
     0.537
Amet_1896
KEGG: mxa:MXAN_1647 hypothetical protein.
  
     0.534
sspH
PFAM: small acid-soluble spore H family protein; KEGG: bld:BLi02904 acid-soluble spore protein H.
       0.506
Amet_0491
Hypothetical protein; KEGG: hsa:1834 dentin sialophosphoprotein.
  
     0.493
Amet_4759
KEGG: tte:TTE2690 hypothetical protein.
   
 0.480
Amet_4762
PFAM: Peptidase M1, membrane alanine aminopeptidase-like; KEGG: tte:TTE2694 aminopeptidase N.
   
 0.480
Amet_2162
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
    0.460
Amet_2161
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.455
Amet_2163
TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: tte:TTE2369 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
       0.455
Amet_2164
TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tte:TTE1013 phospho-2-dehydro-3-deoxyheptonate aldolase.
       0.455
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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