STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citGPFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: ctc:CTC02555 citG protein. (295 aa)    
Predicted Functional Partners:
Amet_2958
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
  
 0.994
Amet_3411
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.982
Amet_3222
PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: ctc:CTC02556 citX protein.
 
 
 0.976
Amet_3410
Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: ctc:CTC02560 citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.964
Amet_3409
TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; KEGG: ctc:CTC02559 citrate lyase alpha chain.
 
  
 0.959
Amet_3225
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.950
Amet_3224
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: fnu:FN1379 citrate lyase beta chain / citryl-CoA lyase subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.925
Amet_3223
TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; KEGG: ctc:CTC02559 citrate lyase alpha chain.
 
  
 0.910
Amet_4603
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: cth:Cthe_2404 transcriptional regulator, GntR family.
      0.755
Amet_3412
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ctc:CTC02561 fumarate hydratase subunit B.
       0.692
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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