STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_3513PFAM: Uncharacterized protein UPF0065; KEGG: bha:BH2007 hypothetical protein. (344 aa)    
Predicted Functional Partners:
Amet_3511
PFAM: protein of unknown function DUF112, transmembrane; KEGG: bha:BH2009 hypothetical protein.
 
  
 0.929
Amet_1107
PFAM: protein of unknown function DUF112, transmembrane; KEGG: dsy:DSY0992 hypothetical protein.
 
  
 0.881
Amet_1267
PFAM: protein of unknown function DUF112, transmembrane; KEGG: jan:Jann_1159 protein of unknown function DUF112, transmembrane.
 
  
 0.881
Amet_3082
PFAM: protein of unknown function DUF112, transmembrane; KEGG: fnu:FN2105 integral membrane protein.
 
  
 0.881
Amet_1105
PFAM: Uncharacterized protein UPF0065; KEGG: dsy:DSY0995 hypothetical protein.
  
     0.775
Amet_3083
KEGG: fnu:FN2104 hypothetical protein.
  
  
 0.587
Amet_2937
PFAM: putative ammonia monooxygenase; KEGG: dsy:DSY3458 hypothetical protein.
 
    0.472
Amet_3512
Hypothetical protein.
       0.447
Amet_3514
methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.404
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.