STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_3721PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: efa:EF0645 exfoliative toxin A, putative. (320 aa)    
Predicted Functional Partners:
Amet_3720
TIGRFAM: C_GCAxxG_C_C family protein; KEGG: efa:EF0664 hypothetical protein.
 
   
 0.932
Amet_0767
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
  
    0.588
Amet_2942
KEGG: lwe:lwe0497 membrane protein.
   
    0.531
Amet_3096
Molybdopterin oxidoreductase; PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: swo:Swol_0658 glutamate synthase beta chain-related oxidoreductase, containing 2Fe-2S and 4Fe-4S clusters.
 
   
 0.505
Amet_0826
1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: cac:CAC0232 1-phosphofructokinase (fructoso 1-phosphate kinase); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.455
Amet_4268
1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: cac:CAC0232 1-phosphofructokinase (fructoso 1-phosphate kinase); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.455
Amet_0672
KEGG: ppr:PBPRA1095 hypothetical integral membrane protein.
 
     0.435
Amet_1379
KEGG: nph:NP1830A hypothetical protein.
  
     0.413
Amet_0669
D-proline reductase (dithiol).
  
     0.400
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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