STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_3913PFAM: protein of unknown function DUF303, acetylesterase putative; KEGG: cac:CAC0529 acetylxylan esterase related enzyme. (282 aa)    
Predicted Functional Partners:
Amet_3912
PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0530 hypothetical protein.
 
     0.937
Amet_3095
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: swo:Swol_0657 NADH dehydrogenase (quinone).
  
 
 0.895
Amet_4663
PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase.
  
 
 0.834
Amet_2041
PFAM: NmrA family protein; KEGG: lwe:lwe1807 hypothetical protein.
  
 
 0.821
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.761
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.761
Amet_4657
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tte:TTE0445 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
   0.752
Amet_3096
Molybdopterin oxidoreductase; PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: swo:Swol_0658 glutamate synthase beta chain-related oxidoreductase, containing 2Fe-2S and 4Fe-4S clusters.
  
 
 0.715
Amet_3611
Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: dsy:DSY4491 hypothetical protein.
  
   0.616
Amet_4306
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0867 4Fe-4S ferredoxin, iron-sulfur binding.
   
   0.602
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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