STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_4020KEGG: cth:Cthe_1621 hypothetical protein. (39 aa)    
Predicted Functional Partners:
Amet_4021
KEGG: cth:Cthe_1622 hypothetical protein.
       0.691
Amet_4022
TIGRFAM: phage major tail protein, phi13 family; KEGG: bca:BCE_0406 phage major tail protein, phi13 family subfamily.
       0.678
Amet_4023
KEGG: cth:Cthe_1624 hypothetical protein.
       0.678
Amet_4024
TIGRFAM: phage protein, HK97 gp10 family; KEGG: cth:Cthe_1625 phage protein, HK97 GP10 family.
       0.678
Amet_4025
TIGRFAM: phage head-tail adaptor, putative; KEGG: bca:BCE_0403 phage head-tail adaptor, putative.
       0.678
Amet_4026
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: cth:Cthe_1627 uncharacterized phage protein.
       0.678
Amet_4028
TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: bca:BCE_0400 phage major capsid protein, HK97 family.
       0.640
Amet_4030
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: det:DET1087 portal protein, HK97 family, putative.
       0.613
Amet_4019
KEGG: cth:Cthe_1618 hypothetical protein.
       0.605
Amet_4018
Hypothetical protein.
       0.573
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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