STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_4193PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 Phosphotransferase system cellobiose-specific component IIA. (107 aa)    
Predicted Functional Partners:
Amet_4196
PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lmf:LMOf2365_2663 PTS system, beta-glucoside-specific, IIB component.
 
 0.998
Amet_4188
PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: btl:BALH_2193 PTS system, diacetylchitobiose-specific IIB component.
 
 0.997
Amet_4195
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.996
Amet_4187
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.993
Amet_4194
PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
 
 
 0.990
Amet_4185
PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
 
 
 0.970
Amet_0569
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: ade:Adeh_0152 HPrNtr.
   
 0.941
Amet_1258
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cte:CT2211 phosphocarrier protein HPr.
   
 0.941
Amet_4186
PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: sha:SH0190 hypothetical protein.
  
  
 
0.909
Amet_4197
Transcriptional regulator, TrmB; PFAM: sigma-54 factor, interaction domain-containing protein; transcriptional regulator TrmB; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: lwe:lwe1738 transcriptional regulator, putative.
 
   
 0.883
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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