node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amet_0669 | Amet_4220 | Amet_0669 | Amet_4220 | D-proline reductase (dithiol). | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2. | 0.651 |
Amet_0669 | polA | Amet_0669 | Amet_3125 | D-proline reductase (dithiol). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.885 |
Amet_0669 | sbcD | Amet_0669 | Amet_4168 | D-proline reductase (dithiol). | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.734 |
Amet_1785 | Amet_2144 | Amet_1785 | Amet_2144 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | 0.851 |
Amet_1785 | Amet_4220 | Amet_1785 | Amet_4220 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2. | 0.863 |
Amet_1785 | polA | Amet_1785 | Amet_3125 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.897 |
Amet_1785 | rpoA | Amet_1785 | Amet_4449 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.835 |
Amet_1785 | rpoB | Amet_1785 | Amet_4486 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.901 |
Amet_1785 | rpoZ | Amet_1785 | Amet_2789 | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.898 |
Amet_2144 | Amet_1785 | Amet_2144 | Amet_1785 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein. | 0.851 |
Amet_2144 | Amet_2840 | Amet_2144 | Amet_2840 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | Hypothetical protein. | 0.848 |
Amet_2144 | Amet_4219 | Amet_2144 | Amet_4219 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | Putative transcriptional regulator, MerR family; PFAM: regulatory protein, MerR; Methyltransferase type 11; KEGG: btl:BALH_2398 possible transcriptional regulator, MerR family. | 0.867 |
Amet_2144 | Amet_4220 | Amet_2144 | Amet_4220 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2. | 0.820 |
Amet_2144 | polA | Amet_2144 | Amet_3125 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.772 |
Amet_2144 | rpoA | Amet_2144 | Amet_4449 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.796 |
Amet_2144 | rpoB | Amet_2144 | Amet_4486 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Amet_2144 | rpoZ | Amet_2144 | Amet_2789 | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.995 |
Amet_2840 | Amet_2144 | Amet_2840 | Amet_2144 | Hypothetical protein. | PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein. | 0.848 |
Amet_2840 | Amet_4220 | Amet_2840 | Amet_4220 | Hypothetical protein. | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2. | 0.863 |
Amet_2840 | polA | Amet_2840 | Amet_3125 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.891 |