STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_4737Hypothetical protein. (199 aa)    
Predicted Functional Partners:
Amet_4739
PFAM: extracellular solute-binding protein, family 1; KEGG: dsy:DSY1083 hypothetical protein.
 
    0.760
Amet_4740
KEGG: dsy:DSY1081 hypothetical protein.
 
     0.703
Amet_0512
PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH2186 hypothetical protein.
  
     0.692
Amet_1920
KEGG: mac:MA0852 bacitracin ABC transporter, permease protein.
  
     0.684
Amet_4741
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsy:DSY1080 hypothetical protein.
 
     0.663
Amet_4735
PFAM: peptidase M56, BlaR1; KEGG: swo:Swol_0431 antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component-like protein.
 
     0.636
Amet_0181
PFAM: S-layer domain protein; KEGG: tte:TTE0166 S-layer homology domain.
  
     0.635
Amet_3201
TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: cac:CA_P0022 spore germination protein, GrkB.
  
     0.634
Amet_4745
PFAM: protein of unknown function DUF214; KEGG: smu:SMU.1093 putative ABC transporter, permease protein.
 
    0.627
Amet_3228
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_3165 signal transduction histidine kinase with CheB and CheR activity.
  
     0.589
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.