STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG19249.1Accessory Sec system glycosylation chaperone GtfB; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
AMG19248.1
Accessory Sec system glycosyltransferase GtfA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.991
AMG19247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.663
AMG19615.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.662
bshA
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.610
AMG19939.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
AMG19613.1
Teichoic acid biosynthesis protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.547
AMG19858.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.521
AL528_03070
Transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.511
dltC
D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
 
 
 0.483
AMG19254.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.463
Your Current Organism:
Staphylococcus saprophyticus
NCBI taxonomy Id: 29385
Other names: ATCC 15305, BCRC 10786, CCM 883, CCRC 10786, CCRC:10786, CCUG 3706, CIP 76.125, DSM 20229, IAM 12452, JCM 2427, LMG 13350, LMG:13350, NBRC 102446, NCAIM B.01067, NCCB 73011, NCIB 8711, NCIB:8711, NCTC 7292, NRRL B-14751, S. saprophyticus, Staphylococcus sp. HAR3
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