AMG19537.1 protein (Staphylococcus saprophyticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AMG19537.1

Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)

Predicted Functional Partners:

AMG19539.1

0.999

AMG19538.1

0.997

AMG19536.1

0.900

AMG19540.1

0.762

AMG20616.1

0.478

AMG19233.1

0.456

AMG19598.1

0.438

Your Current Organism:

Staphylococcus saprophyticus

NCBI taxonomy Id: 29385
Other names: ATCC 15305, BCRC 10786, CCM 883, CCRC 10786, CCRC:10786, CCUG 3706, CIP 76.125, DSM 20229, IAM 12452, JCM 2427, LMG 13350, LMG:13350, NBRC 102446, NCAIM B.01067, NCCB 73011, NCIB 8711, NCIB:8711, NCTC 7292, NRRL B-14751, S. saprophyticus, Staphylococcus sp. HAR3

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMG19233.1	AMG19537.1	AL528_02950	AL528_04680	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
AMG19233.1	AMG19538.1	AL528_02950	AL528_04685	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AMG19536.1	AMG19537.1	AL528_04675	AL528_04680	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AMG19536.1	AMG19538.1	AL528_04675	AL528_04685	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AMG19536.1	AMG19539.1	AL528_04675	AL528_04690	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AMG19536.1	AMG19540.1	AL528_04675	AL528_04695	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
AMG19537.1	AMG19233.1	AL528_04680	AL528_02950	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
AMG19537.1	AMG19536.1	AL528_04680	AL528_04675	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AMG19537.1	AMG19538.1	AL528_04680	AL528_04685	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AMG19537.1	AMG19539.1	AL528_04680	AL528_04690	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMG19537.1	AMG19540.1	AL528_04680	AL528_04695	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
AMG19537.1	AMG19598.1	AL528_04680	AL528_05015	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AMG19537.1	AMG20616.1	AL528_04680	AL528_10525	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.478
AMG19538.1	AMG19233.1	AL528_04685	AL528_02950	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AMG19538.1	AMG19536.1	AL528_04685	AL528_04675	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AMG19538.1	AMG19537.1	AL528_04685	AL528_04680	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AMG19538.1	AMG19539.1	AL528_04685	AL528_04690	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AMG19538.1	AMG19540.1	AL528_04685	AL528_04695	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AMG19538.1	AMG19598.1	AL528_04685	AL528_05015	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
AMG19538.1	AMG20616.1	AL528_04685	AL528_10525	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422

page 1 of 2

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About