AMG20460.1 protein (Staphylococcus saprophyticus)

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[Homology]

Score

AMG20460.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)

Predicted Functional Partners:

AMG20461.1

0.800

rplU

0.764

rplD

0.760

rpsC

0.759

rpmD

0.756

rpsO

0.756

rplT

0.751

rpmH

0.749

rpsD

0.748

rpsJ

0.747

Your Current Organism:

Staphylococcus saprophyticus

NCBI taxonomy Id: 29385
Other names: ATCC 15305, BCRC 10786, CCM 883, CCRC 10786, CCRC:10786, CCUG 3706, CIP 76.125, DSM 20229, IAM 12452, JCM 2427, LMG 13350, LMG:13350, NBRC 102446, NCAIM B.01067, NCCB 73011, NCIB 8711, NCIB:8711, NCTC 7292, NRRL B-14751, S. saprophyticus, Staphylococcus sp. HAR3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMG20460.1	AMG20461.1	AL528_09730	AL528_09735	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.	0.800
AMG20460.1	rplD	AL528_09730	AL528_05720	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.760
AMG20460.1	rplT	AL528_09730	AL528_08370	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.751
AMG20460.1	rplU	AL528_09730	AL528_08490	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.764
AMG20460.1	rpmD	AL528_09730	AL528_05805	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
AMG20460.1	rpmH	AL528_09730	AL528_02465	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.	0.749
AMG20460.1	rpsC	AL528_09730	AL528_05745	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.759
AMG20460.1	rpsD	AL528_09730	AL528_08160	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.748
AMG20460.1	rpsJ	AL528_09730	AL528_05710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.747
AMG20460.1	rpsO	AL528_09730	AL528_10335	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.756
AMG20461.1	AMG20460.1	AL528_09735	AL528_09730	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
rplD	AMG20460.1	AL528_05720	AL528_09730	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
rplD	rplT	AL528_05720	AL528_08370	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.996
rplD	rplU	AL528_05720	AL528_08490	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplD	rpmD	AL528_05720	AL528_05805	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplD	rpmH	AL528_05720	AL528_02465	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.	0.971
rplD	rpsC	AL528_05720	AL528_05745	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplD	rpsD	AL528_05720	AL528_08160	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.998
rplD	rpsJ	AL528_05720	AL528_05710	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplD	rpsO	AL528_05720	AL528_10335	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994

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