Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALT_0921 | ALT_5571 | A0A0S7DLJ3 | A0A0S7DU15 | Pumilio homolog 2. | Uncharacterized protein. | 0.456 |
ALT_2017 | ALT_3115 | A0A0S7DQN8 | A0A0S7DK10 | Uncharacterized protein. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.501 |
ALT_2017 | ALT_5571 | A0A0S7DQN8 | A0A0S7DU15 | Uncharacterized protein. | Uncharacterized protein. | 0.488 |
ALT_2017 | ALT_6155 | A0A0S7DQN8 | A0A0S7DTQ5 | Uncharacterized protein. | Probable glycosidase C21B10.07. | 0.501 |
ALT_2211 | ALT_3115 | A0A0S7DJP7 | A0A0S7DK10 | Protein SQS1. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.501 |
ALT_2211 | ALT_5571 | A0A0S7DJP7 | A0A0S7DU15 | Protein SQS1. | Uncharacterized protein. | 0.488 |
ALT_2211 | ALT_6155 | A0A0S7DJP7 | A0A0S7DTQ5 | Protein SQS1. | Probable glycosidase C21B10.07. | 0.501 |
ALT_2224 | ALT_3115 | A0A0S7DR17 | A0A0S7DK10 | C2H2-type domain-containing protein. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.501 |
ALT_2224 | ALT_5571 | A0A0S7DR17 | A0A0S7DU15 | C2H2-type domain-containing protein. | Uncharacterized protein. | 0.488 |
ALT_2224 | ALT_6155 | A0A0S7DR17 | A0A0S7DTQ5 | C2H2-type domain-containing protein. | Probable glycosidase C21B10.07. | 0.501 |
ALT_3044 | ALT_5571 | A0A0S7DTG9 | A0A0S7DU15 | Uncharacterized protein. | Uncharacterized protein. | 0.535 |
ALT_3115 | ALT_2017 | A0A0S7DK10 | A0A0S7DQN8 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Uncharacterized protein. | 0.501 |
ALT_3115 | ALT_2211 | A0A0S7DK10 | A0A0S7DJP7 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Protein SQS1. | 0.501 |
ALT_3115 | ALT_2224 | A0A0S7DK10 | A0A0S7DR17 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | C2H2-type domain-containing protein. | 0.501 |
ALT_3115 | ALT_5571 | A0A0S7DK10 | A0A0S7DU15 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Uncharacterized protein. | 0.467 |
ALT_3115 | ALT_5766 | A0A0S7DK10 | A0A0S7DSM4 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.805 |
ALT_3115 | ALT_6896 | A0A0S7DK10 | A0A0S7E485 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | G-patch domain-containing protein. | 0.604 |
ALT_5571 | ALT_0921 | A0A0S7DU15 | A0A0S7DLJ3 | Uncharacterized protein. | Pumilio homolog 2. | 0.456 |
ALT_5571 | ALT_2017 | A0A0S7DU15 | A0A0S7DQN8 | Uncharacterized protein. | Uncharacterized protein. | 0.488 |
ALT_5571 | ALT_2211 | A0A0S7DU15 | A0A0S7DJP7 | Uncharacterized protein. | Protein SQS1. | 0.488 |
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