STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALT_5466Uncharacterized protein. (754 aa)    
Predicted Functional Partners:
ALT_3403
54S ribosomal protein L17, mitochondrial.
   
   0.772
ALT_5105
54S ribosomal protein L9, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
   0.770
ALT_6981
54S ribosomal protein L23, mitochondrial.
   
 
 0.762
ALT_3864
54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
   0.707
ALT_8074
50S ribosomal protein L15.
   
   0.705
ALT_1479
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.702
ALT_7092
54S ribosomal protein yml6, mitochondrial.
   
 
 0.701
ALT_8296
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.697
ALT_5543
54S ribosomal protein L24, mitochondrial.
   
 
 0.691
ALT_3956
54S ribosomal protein L4, mitochondrial.
   
 
 0.690
Your Current Organism:
Aspergillus lentulus
NCBI taxonomy Id: 293939
Other names: A. lentulus, CBS 117885, IBT 27201, KACC 41940, NRRL 35552
Server load: low (26%) [HD]