STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALT_7817Protein TMA23. (286 aa)    
Predicted Functional Partners:
ALT_3806
Probable U3 small nucleolar RNA-associated protein 7.
   
   0.941
ALT_2230
Uncharacterized protein C13G1.09.
   
   0.934
ALT_4653
Suppressor of glycerol defect protein 1.
   
   0.916
ALT_7854
Uncharacterized protein.
   
   0.915
ALT_0927
Protein MAK16; Belongs to the MAK16 family.
   
   0.907
ALT_8176
Uncharacterized protein C4F10.09c.
   
   0.732
ALT_3038
zf-LYAR domain-containing protein.
   
   0.729
ALT_7781
Protein sda1; Belongs to the universal ribosomal protein uS7 family.
   
   0.697
ALT_3935
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.687
ALT_2211
Protein SQS1.
    
 
 0.679
Your Current Organism:
Aspergillus lentulus
NCBI taxonomy Id: 293939
Other names: A. lentulus, CBS 117885, IBT 27201, KACC 41940, NRRL 35552
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