STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALT_9364Protein cft1. (1268 aa)    
Predicted Functional Partners:
ALT_2952
Uncharacterized protein.
   
 0.998
ALT_1808
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.998
ALT_4275
Uncharacterized RING finger protein P8B7.15c.
    
 0.998
ALT_4180
Polyadenylation factor subunit 2.
    
 0.998
ALT_8833
Uncharacterized protein.
   
 0.998
ALT_7616
Endoribonuclease ysh1.
   
 0.997
ALT_4493
RNA polymerase II subunit A C-terminal domain phosphatase ssu72.
    
 0.996
ALT_7037
WD repeat-containing protein 82.
    
 0.996
ALT_8613
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.995
ALT_7753
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.992
Your Current Organism:
Aspergillus lentulus
NCBI taxonomy Id: 293939
Other names: A. lentulus, CBS 117885, IBT 27201, KACC 41940, NRRL 35552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.