STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOL80681.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)    
Predicted Functional Partners:
OOL80680.1
PspC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.821
OOL80682.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.769
BWX42_01775
Excinuclease ABC subunit A; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.730
OOL80679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.581
OOL81621.1
Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
OOL80730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.400
OOL81180.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.400
Your Current Organism:
Dolosigranulum pigrum
NCBI taxonomy Id: 29394
Other names: ATCC 51524, CCUG 33392, CIP 104051, D. pigrum, IFO 15550, LMG 15126, LMG:15126, NBRC 15550, NCFB 2975, NCIMB 702975
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.