Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL26792.1 | cc4 | SRM1_00113 | SRM1_00112 | Cytochrome c5. | Cytochrome c4 precursor. | 0.918 |
CEL26792.1 | ccoP1 | SRM1_00113 | SRM1_01917 | Cytochrome c5. | Cbb3-type cytochrome c oxidase subunit CcoP1; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.520 |
CEL26792.1 | ccoP2 | SRM1_00113 | SRM1_01913 | Cytochrome c5. | Cbb3-type cytochrome c oxidase subunit CcoP2; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.528 |
CEL26792.1 | ctaA | SRM1_00113 | SRM1_00129 | Cytochrome c5. | Heme A synthase. | 0.535 |
CEL26792.1 | ctaC | SRM1_00113 | SRM1_00136 | Cytochrome c5. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.530 |
CEL26792.1 | dsbA | SRM1_00113 | SRM1_00111 | Cytochrome c5. | Thiol:disulfide interchange protein DsbA precursor. | 0.547 |
CEL26792.1 | engB | SRM1_00113 | SRM1_00114 | Cytochrome c5. | Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.556 |
CEL26792.1 | fbcH | SRM1_00113 | SRM1_04738 | Cytochrome c5. | Cytochrome b/c1. | 0.786 |
CEL26792.1 | mco | SRM1_00113 | SRM1_04623 | Cytochrome c5. | Multicopper oxidase mco. | 0.606 |
CEL26792.1 | petA | SRM1_00113 | SRM1_04740 | Cytochrome c5. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.618 |
cc4 | CEL26792.1 | SRM1_00112 | SRM1_00113 | Cytochrome c4 precursor. | Cytochrome c5. | 0.918 |
cc4 | ccoP1 | SRM1_00112 | SRM1_01917 | Cytochrome c4 precursor. | Cbb3-type cytochrome c oxidase subunit CcoP1; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.401 |
cc4 | ctaA | SRM1_00112 | SRM1_00129 | Cytochrome c4 precursor. | Heme A synthase. | 0.559 |
cc4 | ctaC | SRM1_00112 | SRM1_00136 | Cytochrome c4 precursor. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.648 |
cc4 | dsbA | SRM1_00112 | SRM1_00111 | Cytochrome c4 precursor. | Thiol:disulfide interchange protein DsbA precursor. | 0.747 |
cc4 | engB | SRM1_00112 | SRM1_00114 | Cytochrome c4 precursor. | Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.490 |
cc4 | fbcH | SRM1_00112 | SRM1_04738 | Cytochrome c4 precursor. | Cytochrome b/c1. | 0.830 |
cc4 | petA | SRM1_00112 | SRM1_04740 | Cytochrome c4 precursor. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.801 |
ccoP1 | CEL26792.1 | SRM1_01917 | SRM1_00113 | Cbb3-type cytochrome c oxidase subunit CcoP1; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Cytochrome c5. | 0.520 |
ccoP1 | cc4 | SRM1_01917 | SRM1_00112 | Cbb3-type cytochrome c oxidase subunit CcoP1; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Cytochrome c4 precursor. | 0.401 |
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