Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL26827.1 | CEL26830.1 | SRM1_00148 | SRM1_00151 | Hypothetical protein. | 5'-nucleotidase. | 0.559 |
| CEL26827.1 | caiE_1 | SRM1_00148 | SRM1_00150 | Hypothetical protein. | Carnitine operon protein CaiE. | 0.613 |
| CEL26827.1 | lptA | SRM1_00148 | SRM1_00906 | Hypothetical protein. | Lipopolysaccharide export system protein LptA precursor; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.428 |
| CEL26827.1 | prlC_1 | SRM1_00148 | SRM1_00147 | Hypothetical protein. | Oligopeptidase A. | 0.556 |
| CEL26827.1 | prlC_2 | SRM1_00148 | SRM1_00149 | Hypothetical protein. | Oligopeptidase A. | 0.793 |
| CEL26830.1 | CEL26827.1 | SRM1_00151 | SRM1_00148 | 5'-nucleotidase. | Hypothetical protein. | 0.559 |
| CEL26830.1 | caiE_1 | SRM1_00151 | SRM1_00150 | 5'-nucleotidase. | Carnitine operon protein CaiE. | 0.780 |
| CEL26830.1 | prlC_1 | SRM1_00151 | SRM1_00147 | 5'-nucleotidase. | Oligopeptidase A. | 0.466 |
| CEL26830.1 | prlC_2 | SRM1_00151 | SRM1_00149 | 5'-nucleotidase. | Oligopeptidase A. | 0.581 |
| caiE_1 | CEL26827.1 | SRM1_00150 | SRM1_00148 | Carnitine operon protein CaiE. | Hypothetical protein. | 0.613 |
| caiE_1 | CEL26830.1 | SRM1_00150 | SRM1_00151 | Carnitine operon protein CaiE. | 5'-nucleotidase. | 0.780 |
| caiE_1 | prlC_1 | SRM1_00150 | SRM1_00147 | Carnitine operon protein CaiE. | Oligopeptidase A. | 0.435 |
| caiE_1 | prlC_2 | SRM1_00150 | SRM1_00149 | Carnitine operon protein CaiE. | Oligopeptidase A. | 0.589 |
| groL | hslU | SRM1_04436 | SRM1_00447 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.850 |
| groL | htpG | SRM1_04436 | SRM1_01622 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.947 |
| groL | pepN | SRM1_04436 | SRM1_02244 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Aminopeptidase N. | 0.403 |
| groL | prlC_1 | SRM1_04436 | SRM1_00147 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Oligopeptidase A. | 0.486 |
| groL | prlC_2 | SRM1_04436 | SRM1_00149 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Oligopeptidase A. | 0.474 |
| hslU | groL | SRM1_00447 | SRM1_04436 | ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.850 |
| hslU | htpG | SRM1_00447 | SRM1_01622 | ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.860 |
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