Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
emrK_1Putative multidrug resistance protein EmrK. (356 aa)    
Predicted Functional Partners:
emrY
Putative multidrug resistance protein EmrY.
 
 0.988
emrB
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.976
arpC
Antibiotic efflux pump outer membrane protein ArpC precursor.
 
 0.945
CEL29876.1
Major Facilitator Superfamily protein.
 
 0.880
hsrA_1
Putative transport protein HsrA.
 
 
 0.864
tolC_1
Outer membrane protein TolC precursor.
 
 0.843
aprF
Outer membrane protein precursor.
  
 0.807
bmr3
Multidrug resistance protein 3; Belongs to the major facilitator superfamily.
 
 
 0.762
stp
Multidrug resistance protein stp.
 
 
 0.755
apxIB_1
Toxin RTX-I translocation ATP-binding protein.
  
 0.750
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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