Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dmoA | metQ_3 | SRM1_00292 | SRM1_00291 | Dimethyl-sulfide monooxygenase. | D-methionine-binding lipoprotein MetQ precursor. | 0.635 |
| dmoA | soxC_1 | SRM1_00292 | SRM1_00293 | Dimethyl-sulfide monooxygenase. | Dibenzothiophene desulfurization enzyme C. | 0.968 |
| dmoA | soxC_2 | SRM1_00292 | SRM1_00294 | Dimethyl-sulfide monooxygenase. | Dibenzothiophene desulfurization enzyme C. | 0.958 |
| etfA_1 | fadB_3 | SRM1_04062 | SRM1_03790 | Electron transfer flavoprotein subunit alpha. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.690 |
| etfA_1 | fadJ | SRM1_04062 | SRM1_01823 | Electron transfer flavoprotein subunit alpha. | Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.690 |
| etfA_1 | nuoC | SRM1_04062 | SRM1_03447 | Electron transfer flavoprotein subunit alpha. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.748 |
| etfA_1 | soxC_1 | SRM1_04062 | SRM1_00293 | Electron transfer flavoprotein subunit alpha. | Dibenzothiophene desulfurization enzyme C. | 0.674 |
| etfA_1 | soxC_2 | SRM1_04062 | SRM1_00294 | Electron transfer flavoprotein subunit alpha. | Dibenzothiophene desulfurization enzyme C. | 0.681 |
| etfA_2 | fadB_3 | SRM1_05317 | SRM1_03790 | Electron transfer flavoprotein subunit alpha. | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.690 |
| etfA_2 | fadJ | SRM1_05317 | SRM1_01823 | Electron transfer flavoprotein subunit alpha. | Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.690 |
| etfA_2 | nuoC | SRM1_05317 | SRM1_03447 | Electron transfer flavoprotein subunit alpha. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.748 |
| etfA_2 | soxC_1 | SRM1_05317 | SRM1_00293 | Electron transfer flavoprotein subunit alpha. | Dibenzothiophene desulfurization enzyme C. | 0.676 |
| etfA_2 | soxC_2 | SRM1_05317 | SRM1_00294 | Electron transfer flavoprotein subunit alpha. | Dibenzothiophene desulfurization enzyme C. | 0.681 |
| fadB_3 | etfA_1 | SRM1_03790 | SRM1_04062 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Electron transfer flavoprotein subunit alpha. | 0.690 |
| fadB_3 | etfA_2 | SRM1_03790 | SRM1_05317 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Electron transfer flavoprotein subunit alpha. | 0.690 |
| fadB_3 | fadJ | SRM1_03790 | SRM1_01823 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.630 |
| fadB_3 | nuoC | SRM1_03790 | SRM1_03447 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.584 |
| fadB_3 | soxC_1 | SRM1_03790 | SRM1_00293 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Dibenzothiophene desulfurization enzyme C. | 0.774 |
| fadB_3 | soxC_2 | SRM1_03790 | SRM1_00294 | Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Dibenzothiophene desulfurization enzyme C. | 0.774 |
| fadJ | etfA_1 | SRM1_01823 | SRM1_04062 | Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family. | Electron transfer flavoprotein subunit alpha. | 0.690 |
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