Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL30043.1 | ctaC | SRM1_03397 | SRM1_00136 | Cytochrome c-554 precursor. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.997 |
| CEL30043.1 | fdhF | SRM1_03397 | SRM1_00329 | Cytochrome c-554 precursor. | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.757 |
| CEL30043.1 | fdoH | SRM1_03397 | SRM1_02536 | Cytochrome c-554 precursor. | Formate dehydrogenase-O iron-sulfur subunit. | 0.976 |
| CEL30043.1 | petA | SRM1_03397 | SRM1_04740 | Cytochrome c-554 precursor. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| CEL30043.1 | tuf1_1 | SRM1_03397 | SRM1_05181 | Cytochrome c-554 precursor. | Elongation factor Tu. | 0.831 |
| CEL30043.1 | tuf1_2 | SRM1_03397 | SRM1_05194 | Cytochrome c-554 precursor. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.831 |
| ctaC | CEL30043.1 | SRM1_00136 | SRM1_03397 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c-554 precursor. | 0.997 |
| ctaC | fdhF | SRM1_00136 | SRM1_00329 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.609 |
| ctaC | fdoH | SRM1_00136 | SRM1_02536 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Formate dehydrogenase-O iron-sulfur subunit. | 0.792 |
| ctaC | petA | SRM1_00136 | SRM1_04740 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.997 |
| ctaC | tuf1_1 | SRM1_00136 | SRM1_05181 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Elongation factor Tu. | 0.706 |
| ctaC | tuf1_2 | SRM1_00136 | SRM1_05194 | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.706 |
| fdhD | fdhF | SRM1_00330 | SRM1_00329 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.986 |
| fdhD | fdoH | SRM1_00330 | SRM1_02536 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase-O iron-sulfur subunit. | 0.502 |
| fdhD | fdoI | SRM1_00330 | SRM1_02537 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase, cytochrome b556(fdo) subunit. | 0.421 |
| fdhD | oxyR_1 | SRM1_00330 | SRM1_00331 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. | 0.701 |
| fdhF | CEL30043.1 | SRM1_00329 | SRM1_03397 | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c-554 precursor. | 0.757 |
| fdhF | ctaC | SRM1_00329 | SRM1_00136 | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.609 |
| fdhF | fdhD | SRM1_00329 | SRM1_00330 | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.986 |
| fdhF | fdoH | SRM1_00329 | SRM1_02536 | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase-O iron-sulfur subunit. | 0.848 |
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