Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL27018.1 | CEL27020.1 | SRM1_00341 | SRM1_00343 | N-carbamoyl-D-amino acid hydrolase. | Hypothetical protein. | 0.423 |
| CEL27018.1 | aguA | SRM1_00341 | SRM1_00342 | N-carbamoyl-D-amino acid hydrolase. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.996 |
| CEL27018.1 | dgdA | SRM1_00341 | SRM1_00340 | N-carbamoyl-D-amino acid hydrolase. | 2,2-dialkylglycine decarboxylase. | 0.579 |
| CEL27018.1 | speA | SRM1_00341 | SRM1_00693 | N-carbamoyl-D-amino acid hydrolase. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.406 |
| CEL27020.1 | CEL27018.1 | SRM1_00343 | SRM1_00341 | Hypothetical protein. | N-carbamoyl-D-amino acid hydrolase. | 0.423 |
| CEL27020.1 | aguA | SRM1_00343 | SRM1_00342 | Hypothetical protein. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.484 |
| CEL27561.1 | aguA | SRM1_00891 | SRM1_00342 | 2-oxoglutaramate amidase. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.420 |
| CEL31382.1 | aguA | SRM1_04747 | SRM1_00342 | N-carbamoyl-D-amino acid hydrolase. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.893 |
| aguA | CEL27018.1 | SRM1_00342 | SRM1_00341 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | N-carbamoyl-D-amino acid hydrolase. | 0.996 |
| aguA | CEL27020.1 | SRM1_00342 | SRM1_00343 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | Hypothetical protein. | 0.484 |
| aguA | CEL27561.1 | SRM1_00342 | SRM1_00891 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 2-oxoglutaramate amidase. | 0.420 |
| aguA | CEL31382.1 | SRM1_00342 | SRM1_04747 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | N-carbamoyl-D-amino acid hydrolase. | 0.893 |
| aguA | arcC1 | SRM1_00342 | SRM1_04323 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | Carbamate kinase 1; Belongs to the carbamate kinase family. | 0.461 |
| aguA | atzE | SRM1_00342 | SRM1_02544 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | Biuret hydrolase. | 0.412 |
| aguA | dgdA | SRM1_00342 | SRM1_00340 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 2,2-dialkylglycine decarboxylase. | 0.688 |
| aguA | ramA_2 | SRM1_00342 | SRM1_05257 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | (R)-stereoselective amidase. | 0.846 |
| aguA | speA | SRM1_00342 | SRM1_00693 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.582 |
| aguA | ttgB | SRM1_00342 | SRM1_01295 | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | Putative efflux pump membrane transporter TtgB. | 0.407 |
| arcC1 | aguA | SRM1_04323 | SRM1_00342 | Carbamate kinase 1; Belongs to the carbamate kinase family. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.461 |
| atzE | aguA | SRM1_02544 | SRM1_00342 | Biuret hydrolase. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.412 |
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