Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27084.1 | CEL27095.1 | SRM1_00409 | SRM1_00420 | 8-oxoguanine deaminase. | N-formylglutamate amidohydrolase. | 0.927 |
CEL27084.1 | hutI | SRM1_00409 | SRM1_00419 | 8-oxoguanine deaminase. | Imidazolonepropionase. | 0.879 |
CEL27084.1 | hutU | SRM1_00409 | SRM1_00412 | 8-oxoguanine deaminase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.849 |
CEL27084.1 | ves | SRM1_00409 | SRM1_00411 | 8-oxoguanine deaminase. | Protein Ves. | 0.892 |
CEL27084.1 | yvoA_1 | SRM1_00409 | SRM1_00410 | 8-oxoguanine deaminase. | HTH-type transcriptional repressor YvoA. | 0.940 |
CEL27095.1 | CEL27084.1 | SRM1_00420 | SRM1_00409 | N-formylglutamate amidohydrolase. | 8-oxoguanine deaminase. | 0.927 |
CEL27095.1 | hutI | SRM1_00420 | SRM1_00419 | N-formylglutamate amidohydrolase. | Imidazolonepropionase. | 0.988 |
CEL27095.1 | hutU | SRM1_00420 | SRM1_00412 | N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.805 |
CEL27095.1 | pucI_1 | SRM1_00420 | SRM1_00413 | N-formylglutamate amidohydrolase. | Putative allantoin permease; Belongs to the purine-cytosine permease (2.A.39) family. | 0.553 |
CEL27095.1 | ves | SRM1_00420 | SRM1_00411 | N-formylglutamate amidohydrolase. | Protein Ves. | 0.777 |
CEL27095.1 | yvoA_1 | SRM1_00420 | SRM1_00410 | N-formylglutamate amidohydrolase. | HTH-type transcriptional repressor YvoA. | 0.695 |
CEL27436.1 | ves | SRM1_00763 | SRM1_00411 | Hypothetical protein. | Protein Ves. | 0.467 |
CEL29415.1 | ves | SRM1_02766 | SRM1_00411 | Hypothetical protein. | Protein Ves. | 0.515 |
CEL32300.1 | ves | SRM1_05674 | SRM1_00411 | Hypothetical protein. | Protein Ves. | 0.468 |
hutI | CEL27084.1 | SRM1_00419 | SRM1_00409 | Imidazolonepropionase. | 8-oxoguanine deaminase. | 0.879 |
hutI | CEL27095.1 | SRM1_00419 | SRM1_00420 | Imidazolonepropionase. | N-formylglutamate amidohydrolase. | 0.988 |
hutI | hutU | SRM1_00419 | SRM1_00412 | Imidazolonepropionase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.997 |
hutI | pucI_1 | SRM1_00419 | SRM1_00413 | Imidazolonepropionase. | Putative allantoin permease; Belongs to the purine-cytosine permease (2.A.39) family. | 0.547 |
hutI | ves | SRM1_00419 | SRM1_00411 | Imidazolonepropionase. | Protein Ves. | 0.505 |
hutI | yvoA_1 | SRM1_00419 | SRM1_00410 | Imidazolonepropionase. | HTH-type transcriptional repressor YvoA. | 0.885 |
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